Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015880582.1_cds_XP_016437537.1_33287
CDS Infomation	[gene=LOC107763564] [db_xref=GeneID:107763564] [protein=LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3-like] [exception=unclassified translation discrepancy] [protein_id=XP_016437537.1] [location=complement(join(21589..21654,21800..21922,22006..22134,22261..22329,22421..22501,22718..22822,22963..23187,23303..24847,26276..26368,27593..27913,27916..29008,29156..29277,29370..29618,30445..30606,30675..30845,30996..31112,31216..31326,31582..32337))] [gbkey=CDS]
Sequence	ATGGAAACTCGGAGCCGGAAACTGACGGAGGAAGCCACGTCATCAGCGCCTTCTTCTTCT TATTCTACTTCCTCTGGTCCCACCACTCGCGTTACTAAGCCTGCTCGCCTCACCACACGC GCCCCCTCAACTCGTTCTCGTGTCACAAAACGTTCACTTCCTATGGACTCCACGAATGAA ACTTCCGGGTCGGGTAGCCGAGCCCGTCGTTCGGGTTCGGGTAAGGAAAAAGAACACGAA ATTAGGGATAGGGATGATGAAGATGATAATGATAATGAAAGTGAAAATGATGTAGGGATT TTGCATCATAATTTGACGTCAACAAGTAGTGCACTTCAAGGACTGTTGAGAAAATTAGGT GCTGGGTTGGATGATTTACTGCCGAGTTCAGCAATGGTGGGGTCCGCTTCATCCTCGTCC AACGGGCGGCTGAAGAAGATATTATCGGGTTTAAGAGCTGATGGTGAAGAAGGGAAACAA ATAGAGGCATTGACACAGCTTTGTGTGATGCTTTCTATTGGAACAGAAGACTCTTTGAGC ACTTTTTCAGTGGACTCTTTTGTACCTGTGCTTGTCGGGTTGCTTAATAATCATGGGGGG AGTAGTAATCCTGATATTATGCTTCTTGCAGCTAGGGCGTTAACTCATTTGGTTGATGTT TTACCATCTTCTTGTGCTGCTGTTGTGCATTATGGAGCAGTTTCATGTTTTGTAGCTCGG TTGCTCACTATTGAATACATGGACTTAGCTGAACAGTCTCTACAAGCTTTAAAGAAGATA TCTCAGGAAGACCCAACTGCTTGTTTGCGAGCAGGTGCACTCATGGCTGTGCTTTCGTAT CTCGACTTCTTTTCCACCGGTGTTCAGAGAGTAGCATTAGCAACCGCTGCTAATATGTGC AAGAAGCTGCCTTCGGATGCGGCTGACTTTGTGATGGAAGCTGTTCCACTGTTGACGAAT CTCCTTCAGTATCATGATGCAAAGGTATTAGAGCATGCTTCTATCTGCTTGACCCGGATT GCTGAAGCATTTGCAACATCTCCAGAGAAACTAGATGAACTCTGCAATCACGGACTTGTC ACGCAAGCTGCCTCCCTCATCTCAACCAGTAATTCTGGAGGTGGTCAGGCTTCGCTCAGC ACGGAAACTTACACAGGTTTGATCCGGCTTCTTTCTACGTCTGCCAGTGGTTCTCCATTA GGGGCTAAAACCTTGATGATACTTGGTATCAGTCGGATCCTCAAGGACATTTTATCTGGT TCTGGCCTCGTGGCGACTGTCTCTATTTCACCTGCCTTGAGCAGACCTCCAGAGCAGATT TTTGAGATTGTGAATCTGGCAAACGAGCTTCTTCCTCCGCTGCCTCAAGGAACCATCTCT CTTCCAGTTAGCACTAATTTGTTCATTAGGGGCTCGTTTACAAGGAAACCTTCTGCTAGT GGTTCTGTCAAACAGGAGGATCTGAATGCATCTTCTCAGGAGGTATCAGCTCGTGAGAAA CTATTGAATGATCAACCTGAACTTCTGCAACAATTTGGAACGGATCTCCTTCCTGTTCTA ATCCAGACATATGGATCCAGTGTGAATACTGCAGCACGCCACAAGTGTCTCTCAGTTATT GGAAAACTTATGTATTTCAGTAATGCAGATATGATTCAGTCTTTAATTAATGTCACTAAC GTATCAAGTTTCTTGGCTGGGGTTTTGGCTTGGAAGGATCCCCAAGTACTGGTGCCCGCT CTTCAAATAGCAGAAATTTTAATGCAAAAGCTCCCTGGAGTTTTTGGCAAGATGTTTGTC CGAGAAGGTGTTGTTCATGCTGTTGATACTTTGATACTGACTGAGTCTCATGGTTCTGCT ACTACCCAGCCAACACGTGGTGAGAAGGAGAAATGTAATCGACGCTGTAGCACTAATTCC CATACAGATGCGACTTCTGTTGAAGATCCTAAAAGTCCAGTTCCAAGTATTGGATCTCCG CCAGATCCAATGGAAATTCCGACAGTCAATTCTAATCCTCGGATGGCAGTCAGTTCATGT GCAAAATCTTTCAAGGATAAATACTTCCCTTCAGATTCAGAGGCTACTGAAGCTGGTGCC ACAGATGATCTTCTACAATTGAAGAATCTCTGCATGAAGTTGAATGCTGGTATCGATGAT CAAATAGCTAAACCTAAAGGAAAGTCAAAAACATTTGGGCCTCAGCTTGGGGATATTTCT ATCTGTAAGGAAGAAACCTTGGCTGAAGTGATAGCTGCCATGCTGGGAGAGCTCAGCAAA GGGGACGGTGTTTCAACTTTTGAGTTTATTGGAAGTGGAGTTGTTGCTTCTTTGCTCAAT TATTTTACGTGTGGACATCTTTCTAAGGAAAAAATCTCTAATGCTAGTTTGCCTAGGCTT CGAGAACAAGCAATCAAAAGGTACAAGTCTTTTATTGCAGTTGCTCTTCCTGCTGGTGTT GATGGTGGAAGTGTGGTTCCCATGACTGTTCTGGTCCAAAAGCTTCAAAATGCTCTATGT TCCTTGGAGCGTTTTCCCGTTGTGCTGAGTCATAGTTCCAGATCATCGACAGGAAATGCA CGTCTATCTTCAGGTTTAAGTGCTTTGTCTCAGCCTTTTAAGCTGCGCCTTTGCAGAGCT CAAGGAGAGAAAACCCTCCGCGACTACTCCTCAAATGTTTTGTTAATTGATCCTTTGGCA AGTTTAGTAGCTATTGAAGGATTCCTCTGGCCCCGAGTTAAGCGACCTGAGTCTGGGCAG AAGGCCTCCNTGAGTCTGGGCAAGGCCTCTGCTTCTTCAGGCAACTCTGGGTCTGGGACC ATACCTGCAGGAGGCGGTGCATCATATCCATCTATGTCTACTCCTGCCTCTGCACCTCGT CGTCATTCTACACGATCTAGGTCAGCAGTTAATATAAATGACAGTGCTAAGGGGTCACTG CAGGAAAAAGATGGAAGCTCTTCGAAGGGCAAAGGAAAAGCGGTTATGAAGCCTGCTCAA GGAGATTGCAGGGGACCTCAAACAAAAAATGCTGCTCGAAGAAAAGCAGCCTTGGATAAG GATACAGAGGGGAAACCTGTTAATGGGGACTCTTCTTCAGAGGATGACGAGCTGGATATT TCTCACGTTGAACTTGATGATGCTTTGGTGATTGAAGACGATATGTCCGACGAAGATGAA GATGACCATGATGATATGCTGAGGGATGATTCGCTTCCTGTCTGCTTGCAAGATGAAGTG CATGATGTTAAATTGGTAGATTCCTCGGAGGATAGTCCTCTTGCACAGACGCCAAGTGAT AGCCATACAAATGCTGGTGGTGGTTCTAGGAGCAGAACCTCCGCTGGGGGATCTAATTCC ATTGAGTTCAGGAGTAGGAGTTCCTACAGTTCACGGGGTGCAATGTCATTTGCTGCTGCT GCCATGGCGGGACTTTCATCTGCTGGTGGTCGAGGTGTGAGGGACGCTAGAGATCAGCAC GGGCGCCCTCTATTTGGCTCTGGTGATCCACCAAAACTAATATTTTCTGTTGGTGGAAAG CTGCTTAATAGGCACTTGACTATCTACCAGGCTATCCAGCGGCAGCTTGTTCTAGACGAG GATGATGATGAGAGAGATGATGGCTATGATTTTGCATCCAGTGACGGAAGTAGGGTTTGG AGTGATATTTACACTATCACATACCAAAGGGCAGACAGCCAAGCTGAGGGGTTGATGAAT GGGGCTGGGAGCTCAATTTCTTCCAAGTCTACGAAAGCCAGTTCTTTGGAAAGTTCCAGT GCTGATCCCTCCTTGCTTCAAGCATCATTGTTAGATAGTATATTGCGGGGAGAACTTCCT TGTGATCTGGAGAAAAGTAACCCTACTTACAGTATTTTATACCTATTACGTGTATTGGAG GCGCTGAATCGGCTTGCCCCCCGTTTGCGTGTCCTTTCACTGATTGATGATTACGCTGAA GGAAAAGTTTCTAGTTTAGATGAGGTCAATACTACGGTCGTCAAAATTCCTTATGAGGAA TTTGTTAATAGTAAGCTCACTCCAAAATTGGCACGACAGATCCAGGATGCTCTTGCACTT TGTAGTGGGTCTCTTCCATCTTGGTGTTACCAGTTGACAAAGGCCTGTCCATTTCTTTTT CCGTTTGAGACTCGGCGCCAGTTCTTCTATTCAACTGCTTTTGGGTTATCACGCGCTTTA AATAGGCTACAGCAACAGCAAGGTGCTGAAGGTAATGGATCTACTCATGAGAGAGCAGTT AGAGTTGGTAGATTGCAGCGCCAGAAAGTTCGTGTCTCAAGGAACCGCATTCTGGATTCT GCTGCTAAAGTAATGGAGATGTACTCTAGCCAAAAAGCTGTTCTTGAAGTTGAATATTTT GGTGAAGTTGGTACTGGCTTGGGTCCTACACTGGAGTTTTATACCCTTTTAAGTCATGAT CTTCAAAAAGTCGGACTTGGAATGTGGAGGTCTGGTTCATCATCAACGTCAAATGGACAT TCGATGGAAGTTTGTGTAGATAATAAATTAAGTGGGGGTGATAAAGATCTTGTCCGAGCA CCTCTTGGATTATTCCCATGTCCCTGGCCACCACATGCTGATACTGTTAATGGAGGTCAA TTCTGTAAGGTAATTGAACATTTCCGCTTGCTTGGACGTGTTATGGCCAAAGCTCTTCAA GATGGACGGCTTATGGACCTTCCATTGTCAACTGCCTTCTATAAGCTTGTTCTTGGCGAA GAGCTTGATTTGTACGATATTCTTTCTTTTGACGCTGAATTAGGGAAGACTTTGCAAGAG TTACAAGCTCTTGTTAGTCGAAAGCAATATATAGAATCTATGGAAGATCAGAACCAAGAC AAATTTTATGACGTGCATTTCCACGGGACACCAATTGAGGATCTATGTTTAGATTTCACA CTTCCCGGCTATCCTGAATATGTTCTTAAAGCAGGCGATGAGAATGTGGATCTCAGTAAC TTGGAGGAATACGTTTCTTTGGTAGTTGATGCTACTGTCAGGTCTGGAATCAGGCAGCAA GCGGAAGCTTTTAGATCTGGCTTCAATCAGGTTTTTGACATTTCAACTCTACAAATATTC TCTGCTACAGAGTTGGACTACTTGTTATGTGGCCGTCGAGAGTTGTGGAAGCCCGAGACG TTAGTAGATCATATTAAATTCGACCATGGGTACACAGCCAAGAGTCCTCCCATTATTCAC TTACTAGAGATTATGGGAGAGTTCACACTGGAGCAGCAACGAGCATTCTGTCAGTTTGTC ACTGGCGCTCCCCGGCTCCCTCCAGGTGGTCTTGCTGGTCTGAATCCTAAGTTGACAATT GTGAGGAAGCATTCATCCAATGCTGGCAATGCAGCACACAACAGTAATGCACCATCAGAA TCTGCAGATGAAGACCTACCTAGCGTGATGACATGTGCTAATTACTTGAAACTTCCTCCC TATTCTACTAAGGAAATCATGTACAAGAAGTTACTCTATGCCATTAATGAAGGTCAAGGA TCTTTTGATTTGTCATAA

Peptide Sequence

PEP ID	XP_016437537.1
PEP Infomation	PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3-like [Nicotiana tabacum]
Sequence	METRSRKLTEEATSSAPSSSYSTSSGPTTRVTKPARLTTRAPSTRSRVTKRSLPMDSTNE TSGSGSRARRSGSGKEKEHEIRDRDDEDDNDNESENDVGILHHNLTSTSSALQGLLRKLG AGLDDLLPSSAMVGSASSSSNGRLKKILSGLRADGEEGKQIEALTQLCVMLSIGTEDSLS TFSVDSFVPVLVGLLNNHGGSSNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVAR LLTIEYMDLAEQSLQALKKISQEDPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMC KKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASICLTRIAEAFATSPEKLDELCNHGLV TQAASLISTSNSGGGQASLSTETYTGLIRLLSTSASGSPLGAKTLMILGISRILKDILSG SGLVATVSISPALSRPPEQIFEIVNLANELLPPLPQGTISLPVSTNLFIRGSFTRKPSAS GSVKQEDLNASSQEVSAREKLLNDQPELLQQFGTDLLPVLIQTYGSSVNTAARHKCLSVI GKLMYFSNADMIQSLINVTNVSSFLAGVLAWKDPQVLVPALQIAEILMQKLPGVFGKMFV REGVVHAVDTLILTESHGSATTQPTRGEKEKCNRRCSTNSHTDATSVEDPKSPVPSIGSP PDPMEIPTVNSNPRMAVSSCAKSFKDKYFPSDSEATEAGATDDLLQLKNLCMKLNAGIDD QIAKPKGKSKTFGPQLGDISICKEETLAEVIAAMLGELSKGDGVSTFEFIGSGVVASLLN YFTCGHLSKEKISNASLPRLREQAIKRYKSFIAVALPAGVDGGSVVPMTVLVQKLQNALC SLERFPVVLSHSSRSSTGNARLSSGLSALSQPFKLRLCRAQGEKTLRDYSSNVLLIDPLA SLVAIEGFLWPRVKRPESGQKASXSLGKASASSGNSGSGTIPAGGGASYPSMSTPASAPR RHSTRSRSAVNINDSAKGSLQEKDGSSSKGKGKAVMKPAQGDCRGPQTKNAARRKAALDK DTEGKPVNGDSSSEDDELDISHVELDDALVIEDDMSDEDEDDHDDMLRDDSLPVCLQDEV HDVKLVDSSEDSPLAQTPSDSHTNAGGGSRSRTSAGGSNSIEFRSRSSYSSRGAMSFAAA AMAGLSSAGGRGVRDARDQHGRPLFGSGDPPKLIFSVGGKLLNRHLTIYQAIQRQLVLDE DDDERDDGYDFASSDGSRVWSDIYTITYQRADSQAEGLMNGAGSSISSKSTKASSLESSS ADPSLLQASLLDSILRGELPCDLEKSNPTYSILYLLRVLEALNRLAPRLRVLSLIDDYAE GKVSSLDEVNTTVVKIPYEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLF PFETRRQFFYSTAFGLSRALNRLQQQQGAEGNGSTHERAVRVGRLQRQKVRVSRNRILDS AAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLGMWRSGSSSTSNGH SMEVCVDNKLSGGDKDLVRAPLGLFPCPWPPHADTVNGGQFCKVIEHFRLLGRVMAKALQ DGRLMDLPLSTAFYKLVLGEELDLYDILSFDAELGKTLQELQALVSRKQYIESMEDQNQD KFYDVHFHGTPIEDLCLDFTLPGYPEYVLKAGDENVDLSNLEEYVSLVVDATVRSGIRQQ AEAFRSGFNQVFDISTLQIFSATELDYLLCGRRELWKPETLVDHIKFDHGYTAKSPPIIH LLEIMGEFTLEQQRAFCQFVTGAPRLPPGGLAGLNPKLTIVRKHSSNAGNAAHNSNAPSE SADEDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS

Transcript Sequence

Gene sequence data has not been registered.